| compatible (seqan3) | gap_score (seqan3) | pod_tuple< type0 > (seqan3) | standard_layout (seqan3) |
concatenated_sequences (seqan3) |
| pod_tuple< type0, types... > (seqan3) | static_band (seqan3) |
aa10li (seqan3) | configuration (seqan3) | predicate (std) | strata (seqan3::search_cfg) |
aa10murphy (seqan3) | const_iterable_range (seqan3) | hash< alphabet_t > (std) | alignment_file_header::program_info_t (seqan3) | stream_REMOVEME (seqan3) |
aa20 (seqan3) | const_reference (seqan3) | hash< seqan3::dynamic_bitset< cap > > (std) | pseudo_random_access_iterator (seqan3) | strict_weak_order (std) |
aa27 (seqan3) | const_reference< rng_t > (seqan3) | hash< urng_t > (std) | pseudo_random_access_range (seqan3) | structure_file_input (seqan3) |
aligned_allocator (seqan3) | constructible_from (std) |
|
| structure_file_input_default_traits_aa (seqan3) |
aligned_ends (seqan3::align_cfg) | container (seqan3) | structure_file_input_default_traits_rna (seqan3) |
aligned_sequence (seqan3) | convertible_to (std) | implicitly_convertible_to (seqan3) | qualified (seqan3) | structure_file_input_format (seqan3) |
alignment_coordinate (seqan3) | copy_constructible (std) | innermost_value_type (seqan3) | quality_alphabet (seqan3) | structure_file_input_options (seqan3) |
alignment_file_header (seqan3) | copyable (std) | input_directory_validator (seqan3) | quality_base (seqan3) | structure_file_input_traits (seqan3) |
alignment_file_input (seqan3) |
| input_file_validator (seqan3) |
| structure_file_output (seqan3) |
alignment_file_input_default_traits (seqan3) | input_stream_over (seqan3) | structure_file_output_format (seqan3) |
alignment_file_input_format (seqan3) | debug_stream_type (seqan3) | insertion (seqan3::search_cfg) | random_access_container (seqan3) | structure_file_output_options (seqan3) |
alignment_file_input_options (seqan3) | deep (seqan3::views) | integral (std) | aligned_allocator::rebind (seqan3) | structured_aa (seqan3) |
alignment_file_input_traits (seqan3) | default_constructible (std) | invalid_alignment_configuration (seqan3) | record (seqan3) | structured_rna (seqan3) |
alignment_file_output (seqan3) | deletion (seqan3::search_cfg) | invalid_char_assignment (seqan3) | ref_info_not_given (seqan3) | substitution (seqan3::search_cfg) |
alignment_file_output_format (seqan3) | derived_from (std) | invocable (std) | reference (seqan3) | swappable (std) |
alignment_file_output_options (seqan3) | destructible (std) | io_error (seqan3) | reference< it_t > (seqan3) | swappable_with (std) |
alignment_range (seqan3) | difference_type (seqan3) | is_constexpr_default_constructible (seqan3) | reference< rng_t > (seqan3) |
|
alignment_range::alignment_range_iterator (seqan3) | difference_type< it_t > (seqan3) | is_constexpr_default_constructible< t > (seqan3) | regex_validator (seqan3) |
alignment_result (seqan3) | difference_type< rng_t > (seqan3) | is_execution_policy (seqan3) | regular (std) | to_chars_result (std) |
alphabet (seqan3) | dna15 (seqan3) | iterator_tag (seqan3) | regular_invocable (std) | too_few_arguments (seqan3) |
alphabet (seqan3::custom) | dna3bs (seqan3) |
| relation (std) | too_many_arguments (seqan3) |
alphabet< char_type > (seqan3::custom) | dna4 (seqan3) | remove_rvalue_reference (seqan3) | total (seqan3::search_cfg) |
alphabet< uint_type > (seqan3::custom) | dna5 (seqan3) | lower_bound (seqan3) | required_option_missing (seqan3) | totally_ordered (std) |
alphabet_base (seqan3) | dot_bracket3 (seqan3) |
| reservible_container (seqan3) | totally_ordered_with (std) |
alphabet_base< derived_type, 1ul, char_t > (seqan3) | dssp9 (seqan3) | result (seqan3::align_cfg) | transformation_trait (seqan3) |
alphabet_proxy (seqan3) | dynamic_bitset (seqan3) | mask (seqan3) | rna15 (seqan3) | trivial (seqan3) |
alphabet_tuple_base (seqan3) |
| masked (seqan3) | rna4 (seqan3) | trivially_copyable (seqan3) |
alphabet_variant (seqan3) | match_score (seqan3) | rna5 (seqan3) | trivially_destructible (seqan3) |
aminoacid_alphabet (seqan3) | end_gaps (seqan3) | max_error (seqan3::search_cfg) | rna_structure_alphabet (seqan3) | tuple_element< elem_no, seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats > > (std) |
aminoacid_base (seqan3) | equality_comparable (std) | max_error (seqan3::align_cfg) | rvalue_reference (seqan3) | tuple_element< elem_no, seqan3::record< field_types, field_ids > > (std) |
aminoacid_empty_base (seqan3) | equality_comparable_with (std) | max_error_rate (seqan3::search_cfg) | rvalue_reference< it_t > (seqan3) | tuple_element< i, tuple_t > (std) |
aminoacid_scoring_scheme (seqan3) | explicitly_convertible_to (seqan3) | mismatch_score (seqan3) | rvalue_reference< rng_t > (seqan3) | tuple_like (seqan3) |
argument_parser (seqan3) |
| mode (seqan3::search_cfg) |
| tuple_size< seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats > > (std) |
argument_parser_compatible_option (seqan3) | mode (seqan3::align_cfg) | tuple_size< seqan3::record< field_types, field_ids > > (std) |
argument_parser_meta_data (seqan3) | fields (seqan3) | movable (std) | sam_dna16 (seqan3) | tuple_size< tuple_t > (std) |
argument_parsing (seqan3::custom) | file_open_error (seqan3) | move_constructible (std) | sam_tag_dictionary (seqan3) | type_conversion_failed (seqan3) |
arithmetic (seqan3) | file_validator_base (seqan3) |
| sam_tag_type (seqan3) | type_identity (std) |
arithmetic_range_validator (seqan3) | floating_point (seqan3) | same_as (std) |
|
assignable_from (std) | fm_index (seqan3) | named_enumeration (seqan3) | scoring (seqan3::align_cfg) |
| fm_index_cursor (seqan3) | nucleotide_alphabet (seqan3) | scoring_scheme (seqan3) | unary_type_trait (seqan3) |
fm_index_cursor_specialisation (seqan3) | nucleotide_base (seqan3) | scoring_scheme_base (seqan3) | unexpected_end_of_input (seqan3) |
back_end_first (seqan3) | fm_index_specialisation (seqan3) | nucleotide_scoring_scheme (seqan3) | semialphabet (seqan3) | ungapped (seqan3) |
back_end_second (seqan3) | format_bam (seqan3) |
| semialphabet_any (seqan3) | unhandled_extension_error (seqan3) |
band (seqan3::align_cfg) | format_embl (seqan3) | semiregular (std) | unknown_option (seqan3) |
bi_fm_index (seqan3) | format_error (seqan3) | option_declared_multiple_times (seqan3) | sequence_container (seqan3) | unsequenced_policy (seqan3) |
bi_fm_index_cursor (seqan3) | format_fasta (seqan3) | output (seqan3::search_cfg) | sequence_end_gap_specifier_base (seqan3) | unsigned_integral (std) |
bi_fm_index_cursor_specialisation (seqan3) | format_fastq (seqan3) | output_directory_validator (seqan3) | sequence_file_input (seqan3) | upper_bound (seqan3) |
bi_fm_index_specialisation (seqan3) | format_genbank (seqan3) | output_file_validator (seqan3) | sequence_file_input_default_traits_aa (seqan3) |
|
bin_literal (seqan3) | format_sam (seqan3) | output_stream_over (seqan3) | sequence_file_input_default_traits_dna (seqan3) |
bitcompressed_vector (seqan3) | format_vienna (seqan3) | overflow_error_on_conversion (seqan3) | sequence_file_input_format (seqan3) | validation_failed (seqan3) |
boolean (std) | forwarding_range (seqan3) |
| sequence_file_input_options (seqan3) | validator (seqan3) |
builtin_character (seqan3) | from_chars_result (std) | sequence_file_input_traits (seqan3) | value_list_validator (seqan3) |
| front_end_first (seqan3) | parallel_policy (seqan3) | sequence_file_output (seqan3) | value_type (seqan3) |
front_end_second (seqan3) | parallel_unsequenced_policy (seqan3) | sequence_file_output_format (seqan3) | value_type< it_t > (seqan3) |
cereal_archive (seqan3) |
| parse_error (seqan3) | sequence_file_output_options (seqan3) | value_type< rng_t > (seqan3) |
cereal_input_archive (seqan3) | parser_design_error (seqan3) | sequenced_policy (seqan3) |
|
cereal_output_archive (seqan3) | gap (seqan3) | parser_invalid_argument (seqan3) | shape (seqan3) |
cereal_text_archive (seqan3) | gap (seqan3::align_cfg) | phred42 (seqan3) | signed_integral (std) | weakly_assignable_from (seqan3) |
cerealisable (seqan3) | gap_decorator (seqan3) | phred63 (seqan3) | size_type (seqan3) | writable_alphabet (seqan3) |
cigar (seqan3) | gap_decorator::gap_decorator_iterator (seqan3) | phred68legacy (seqan3) | size_type< it_t > (seqan3) | writable_quality_alphabet (seqan3) |
cigar_op (seqan3) | gap_erase_failure (seqan3) | pipeable_config_element (seqan3) | size_type< rng_t > (seqan3) | writable_semialphabet (seqan3) |
common_reference_with (std) | gap_open_score (seqan3) | plain_byte_alphabet (sdsl) | small_string (seqan3) | wuss (seqan3) |
common_with (std) | gap_scheme (seqan3) | pod_tuple (seqan3) | small_vector (seqan3) | |
| | | | |